The detailed information of tRNA gene sequence


Sequence ID>WENV170973396
Genome IDMTKY01035616
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2104
End posion on genome 2179
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctgacgaacc
tRNA gene sequence 
GGGGTGTTAGCTCAGCTTGGTTAGAGTGCCTGCCTGTCACGCAGGAGGTCGCGAGTTCGA
GTCTCGTACACCCCGCac
Downstream region at tRNA end position 
gcttagctgc
Secondary structure (Cloverleaf model)
>WENV170973396	Asp	GTC
                   c      GCac gcttagctgc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A          T G
                    T     T G C T C     A
    T C G A        A      + | | | |     G
  T         C T C G       G C G A G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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