The detailed information of tRNA gene sequence


Sequence ID>WENV170973412
Genome IDMTKY01037448
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 959
End posion on genome 1044
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttatcgacgc
tRNA gene sequence 
GGAGGCGTGGCCGAGTGGTTTAAGGCGGTGGTCTTGAAAACCATTGGGCGAAAGCCCCAG
GGGTTCGAATCCTCTCGCCTCCGCCA
Downstream region at tRNA end position 
tttcacccca
Secondary structure (Cloverleaf model)
>WENV170973412	Ser	TGA
                   c      GCCA tttcacccca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | + | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGGGCGAAAGCCCC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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