The detailed information of tRNA gene sequence


Sequence ID>WENV170973451
Genome IDMTKY01041656
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1569
End posion on genome 1480
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcgtcggc
tRNA gene sequence 
GGTGGCGTGTCCGAGTGGCCTAAGGAGCACGCCTCGAAAGCGTGTGTGGGCGGAAGTCCA
CCCAGGGTTCGAATCCCTGCGCCACCGCCA
Downstream region at tRNA end position 
gtgaagttgt
Secondary structure (Cloverleaf model)
>WENV170973451	Ser	CGA
                   c      GCCA gtgaagttgt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       C A G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGTGGGCGGAAGTCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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