The detailed information of tRNA gene sequence


Sequence ID>WENV170973469
Genome IDMTKY01042780
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 156
End posion on genome 82
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcgagcaggg
tRNA gene sequence 
GCGCCCTTCGTCTATCGGTTAGGACGACAGCCTTTCACGTTGTAAAGACGGGTTCGACTC
CCGTAGGGCGCGCCA
Downstream region at tRNA end position 
ttctcatttt
Secondary structure (Cloverleaf model)
>WENV170973469	Glu	TTC
                   g      GCCA ttctcatttt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     T G C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    A - T
                    C - G
                    A - T
                    G + T
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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