The detailed information of tRNA gene sequence


Sequence ID>WENV170973478
Genome IDMTKY01044503
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 222
End posion on genome 314
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctgatttgc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAATCGTCATACGCTCTAAAAGC
GTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ctatcgcaat
Secondary structure (Cloverleaf model)
>WENV170973478	Ser	GCT
                   c      GCCA ctatcgcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACGCTCTAAAAGCGTATC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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