The detailed information of tRNA gene sequence


Sequence ID>WENV170973484
Genome IDMTKY01045341
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 162
End posion on genome 72
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctcgtccac
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCTCGCCTGGAACGCGGGTTGGGGTTTATAGCCC
CTCAGGGGTTCAAATCCCCTATCCTCCGCCG
Downstream region at tRNA end position 
cggacgcggc
Secondary structure (Cloverleaf model)
>WENV170973484	Ser	GGA
                   c      GCCG cggacgcggc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGGTTTATAGCCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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