The detailed information of tRNA gene sequence


Sequence ID>WENV170973507
Genome IDMTKY01046731
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 78643
End posion on genome 78553
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggtttttcc
tRNA gene sequence 
GGAAGGGTGACCGAGCTGGCCTAAGGTGATCGCCTGCTAAGCGATTGTGCGGGAGACCGC
ACCGAGGGTTCAAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
catgatgaag
Secondary structure (Cloverleaf model)
>WENV170973507	Ser	GCT
                   c      GCCA catgatgaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     A
  G         G C C A       G A G G G     C
  G           | | |                 T T
  C         A G G T
    C T A          G     TGTGCGGGAGACCGCACC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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