The detailed information of tRNA gene sequence


Sequence ID>WENV170973515
Genome IDMTKY01046924
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 24414
End posion on genome 24500
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
ccgtcgttgc
tRNA gene sequence 
GCGGGGGTGGCGGAACGGGTAGACGCGCAAGGCTAAGGACCTTGTGGCTGCAAGGCTGTG
GGAGTTCGAGTCTCCCCCTCCGCACCA
Downstream region at tRNA end position 
tgaaagtgag
Secondary structure (Cloverleaf model)
>WENV170973515	Leu	AAG
                   c      ACCA tgaaagtgag
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C          T G
                    T     C C C T C     A
      C A A        G      | | | | |     G
    G       G G C G       G G G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGCTGCAAGGCTGT
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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