The detailed information of tRNA gene sequence


Sequence ID>WENV170973527
Genome IDMTKY01047007
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 588
End posion on genome 673
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtatgcgggc
tRNA gene sequence 
GGAGGGCTGTCCGAGTGGTCGATGGTGGCTGACTTGAAATCAGCTGGGCGCAAGCCCCAG
GGGTTCGAATCCTCTGCCCTCCGCCA
Downstream region at tRNA end position 
gtttttgtgt
Secondary structure (Cloverleaf model)
>WENV170973527	Ser	TGA
                   c      GCCA gtttttgtgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     T C T C C     A
      T G A        G      | | + | |     G
    G       G C C T       A G G G G     C
    G       + | |                   T T
    T       T G G T
      C G A        G     TGGGCGCAAGCCCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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