The detailed information of tRNA gene sequence


Sequence ID>WENV170973539
Genome IDMTKY01047239
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 14719
End posion on genome 14645
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccccgaatac
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGACAGAGCAACAGCCTTCTAAGCTGTGGGTCCCCCGTTCGAG
TCGGGGCGGGCGTGCtt
Downstream region at tRNA end position 
ggctcgtttt
Secondary structure (Cloverleaf model)
>WENV170973539	Arg	TCT
                   c      GCtt ggctcgtttt
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G G G G C     A
      C G A        A      | | | | |     G
    T       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      A C A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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