The detailed information of tRNA gene sequence


Sequence ID>WENV170973544
Genome IDMTKY01047279
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1699
End posion on genome 1775
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaccttagga
tRNA gene sequence 
CGGAGTGTAGCGCAGTCTGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGGAGGTTCGAA
TCCTCTCACTCCGACCA
Downstream region at tRNA end position 
attgaaaagc
Secondary structure (Cloverleaf model)
>WENV170973544	Pro	CGG
                   a      ACCA attgaaaagc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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