The detailed information of tRNA gene sequence


Sequence ID>WENV170973554
Genome IDMTKY01047476
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5849
End posion on genome 5757
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagacgcgaT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTTAAAGCAACGGTTTGCTAAACCGTCGTGCGGGAAATAACC
TGCACCGGGGGTTCGAATCCCCCCCTCTCCGGtt
Downstream region at tRNA end position 
ccattctcgg
Secondary structure (Cloverleaf model)
>WENV170973554	Ser	GCT
                   T      GGtt ccattctcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    C       A A G C
      T T A        A     CGTGCGGGAAATAACCTGCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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