The detailed information of tRNA gene sequence


Sequence ID>WENV170973589
Genome IDMTKY01048081
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12956
End posion on genome 12884
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccggtgtcgc
tRNA gene sequence 
GGGCCTGTAGCTCAACTGGGAGAGCGCTACAATCGCACTGTAGAGGTCAAGGGTTCGAAT
CCCTTCAGGTCCAtac
Downstream region at tRNA end position 
tcgcccgcca
Secondary structure (Cloverleaf model)
>WENV170973589	Ala	CGC
                   c      Atac tcgcccgcca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      C A A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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