The detailed information of tRNA gene sequence


Sequence ID>WENV170973610
Genome IDMTKY01048399
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1428
End posion on genome 1337
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctgatcggC
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCGAAGGTGCAGCACTCGAAATGCTGTGTTGGGTAACCCCCA
ACCGTGGGTTCAAATCCCACCGCCACCGCCC
Downstream region at tRNA end position 
cgggagagcc
Secondary structure (Cloverleaf model)
>WENV170973610	Ser	CGA
                   C      GCCC cgggagagcc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTTGGGTAACCCCCAACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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