The detailed information of tRNA gene sequence


Sequence ID>WENV170973615
Genome IDMTKY01048553
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1473
End posion on genome 1400
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccatcgcgg
tRNA gene sequence 
GGCGGCGTAGCTCAGTCGGTCAGAGCAGCGGAATCATAATCCGCGTGTCAGAGGTTCGAG
TCCTCTCGCCGCTAtga
Downstream region at tRNA end position 
gggtgccggg
Secondary structure (Cloverleaf model)
>WENV170973615	Met	CAT
                   g      Atga gggtgccggg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C T C C     A
      T G A        A      | | | | |     G
    C       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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