The detailed information of tRNA gene sequence


Sequence ID>WENV170973627
Genome IDMTKY01048912
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4475
End posion on genome 4548
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcgggagata
tRNA gene sequence 
GGGCTCATAGTTCAATTGGCAGAACACCGCATTCGCATTGCGAAGGTTGCCGGTTCAACT
CCGGCTGAGTCCACtt
Downstream region at tRNA end position 
gtttagggcc
Secondary structure (Cloverleaf model)
>WENV170973627	Ala	CGC
                   a      ACtt gtttagggcc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T          T C
                    T     C G G C C     A
      T A A        A      | | | | |     A
    T       C T T G       G C C G G     C
    G       | | | |                 T T
    G       G A A C
      C A          A     AGGTT
                    C   A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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