The detailed information of tRNA gene sequence


Sequence ID>WENV170973643
Genome IDMTKY01049355
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1099
End posion on genome 1174
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcctccagt
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTAGAGCAGCGGACTCATAAGCCGCGGGTCACCCGTTCAATC
CGGGTCACCGCCACCA
Downstream region at tRNA end position 
aattttccag
Secondary structure (Cloverleaf model)
>WENV170973643	Met	CAT
                   t      ACCA aattttccag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T G G G C     A
      T G A        A      | | | | |     A
    T       C T C G       A C C C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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