The detailed information of tRNA gene sequence


Sequence ID>WENV170973648
Genome IDMTKY01049396
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1653
End posion on genome 1557
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccctttgcgc
tRNA gene sequence 
GGAGCGGCGTTCGGTCTGGTGGCCGGCCCGGTCTTCAAAACCGGTGTTGGGGGGTAGGCC
CCTCCAGGGTAGGTTCGATTCCTATGCCGCTCCGCCA
Downstream region at tRNA end position 
acttctatca
Secondary structure (Cloverleaf model)
>WENV170973648	SeC(p)	TCA
                   c      GCCA acttctatca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G          T T
                    G     T A T C C     A
      T C T        T      + | | | |     G
    G       G G C T       G T A G G     C
    G       | | | +                 T T
    T       C C G G
      G G          C     TGTTGGGGGGTAGGCCCCTCCAGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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