The detailed information of tRNA gene sequence


Sequence ID>WENV170973659
Genome IDMTKY01049893
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1997
End posion on genome 2087
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccaggttcc
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTAACGGCTAATCCCCG
TTCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
gatacagaaa
Secondary structure (Cloverleaf model)
>WENV170973659	Ser	GGA
                   c      GCCA gatacagaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAACGGCTAATCCCCGTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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