The detailed information of tRNA gene sequence


Sequence ID>WENV170973668
Genome IDMTKY01050661
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 132868
End posion on genome 132962
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acaggagagc
tRNA gene sequence 
GGAGAGATACCGAAGTGGTCATAACGGGACCGACTCGAAATCGGTTTGAGGGCCTAACAG
CTCTCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttattttctt
Secondary structure (Cloverleaf model)
>WENV170973668	Ser	CGA
                   c      GCCA ttattttctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TTGAGGGCCTAACAGCTCTCAC
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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