The detailed information of tRNA gene sequence


Sequence ID>WENV170973675
Genome IDMTKY01050671
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 39205
End posion on genome 39279
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ctgcacgcat
tRNA gene sequence 
GGGGCCGTAGCTCAGTGGGAGAGCGCTGCCTTCGCACGGCAGAGGTCGTGGGTTCAAATC
CCATCGGCTCCACCA
Downstream region at tRNA end position 
ggcatgcctc
Secondary structure (Cloverleaf model)
>WENV170973675	Ala	CGC
                   t      ACCA ggcatgcctc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
        G A        A      + | | | |     A
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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