The detailed information of tRNA gene sequence


Sequence ID>WENV170973679
Genome IDMTKY01050678
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 52737
End posion on genome 52828
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcccgtacct
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGACGATTGGGGCCGCCTGCTAAGTGGTTGTTGGAGTAAAATCC
AACCGAGGGTTCGAATCCCTCCTTCCCCGCCT
Downstream region at tRNA end position 
gaatagtgaa
Secondary structure (Cloverleaf model)
>WENV170973679	Ser	GCT
                   t      GCCT gaatagtgaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        G     TGTTGGAGTAAAATCCAACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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