The detailed information of tRNA gene sequence


Sequence ID>WENV170973703
Genome IDMTKY01050717
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3996
End posion on genome 4072
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttccaagcgg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
tcgcaaagcc
Secondary structure (Cloverleaf model)
>WENV170973703	Met	CAT
                   g      ACCA tcgcaaagcc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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