The detailed information of tRNA gene sequence


Sequence ID>WENV170973705
Genome IDMTKY01050734
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11614
End posion on genome 11539
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cacccgacgt
tRNA gene sequence 
GGGCGTTTAGCTCAGCTGGGAGAGCGCAGCGTTCGCATCGCTGAGGCCGGGGGTTCGAAT
CCCCCAACGTCCACCA
Downstream region at tRNA end position 
tcctttttcc
Secondary structure (Cloverleaf model)
>WENV170973705	Ala	CGC
                   t      ACCA tcctttttcc
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T - A
                     T - A          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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