The detailed information of tRNA gene sequence


Sequence ID>WENV170973716
Genome IDMTKY01050754
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 29286
End posion on genome 29211
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttcaggaaaa
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGCCAGGGGTTCGACT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
ggccaaccag
Secondary structure (Cloverleaf model)
>WENV170973716	Ala	GGC
                   a      ACCA ggccaaccag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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