The detailed information of tRNA gene sequence


Sequence ID>WENV170973717
Genome IDMTKY01050755
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 14273
End posion on genome 14199
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
caccgcggcg
tRNA gene sequence 
GGGCGATTAGCTCAGTCGGTTAGAGCGCCTGCCTCACATGCAGGAGGTCACTGGTTCGAG
TCCAGTATCGCCCACag
Downstream region at tRNA end position 
ccccgtctcc
Secondary structure (Cloverleaf model)
>WENV170973717	Val	CAC
                   g      ACag ccccgtctcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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