The detailed information of tRNA gene sequence


Sequence ID>WENV170973734
Genome IDMTKY01050805
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15422
End posion on genome 15498
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggccgcatcc
tRNA gene sequence 
GGATGTGTAGCTCAGTTGGTTAGAGCGTTCGCTTCACACGCGAGAGGTCAGGGGTTCGAG
TCCCTTCACATCCACCG
Downstream region at tRNA end position 
cctggcggcg
Secondary structure (Cloverleaf model)
>WENV170973734	Val	CAC
                   c      ACCG cctggcggcg
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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