The detailed information of tRNA gene sequence


Sequence ID>WENV170973764
Genome IDMTKY01050908
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 31932
End posion on genome 32025
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccatggcgc
tRNA gene sequence 
GGAGATGTGTCCGAGTTGGCTGAAGGAGCACGATTGGAAATCGTGTATACGTGCAAAACG
CGTATCCTGGGTTCGAATCCCAGCGTCTCCGCCA
Downstream region at tRNA end position 
tcaatttttg
Secondary structure (Cloverleaf model)
>WENV170973764	Ser	GGA
                   c      GCCA tcaatttttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     G A C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       C T G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TATACGTGCAAAACGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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