The detailed information of tRNA gene sequence


Sequence ID>WENV170973769
Genome IDMTKY01050925
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3528
End posion on genome 3440
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattccgtgc
tRNA gene sequence 
GGAAGGATGGCCGAGAGGTTGAAGGCGGCGGTCTTGAAAACCGCTACCCGGTATCCCCGG
GTCGGGGGTTCGAATCCCCCTCCTTCCGCtt
Downstream region at tRNA end position 
aactcccctt
Secondary structure (Cloverleaf model)
>WENV170973769	Ser	TGA
                   c      GCtt aactcccctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TACCCGGTATCCCCGGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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