The detailed information of tRNA gene sequence


Sequence ID>WENV170973770
Genome IDMTKY01050942
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 19267
End posion on genome 19179
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaattcccgc
tRNA gene sequence 
GGAAGGATGGCCGAGTGGTTGAAGGCGGCGGTCTTGAAAACCGCTACCCGGTATCCCCGG
GTCGGGGGTTCGAATCCCCCTCCTTCCGCat
Downstream region at tRNA end position 
cttgatcgcc
Secondary structure (Cloverleaf model)
>WENV170973770	Ser	TGA
                   c      GCat cttgatcgcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TACCCGGTATCCCCGGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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