The detailed information of tRNA gene sequence


Sequence ID>WENV170973777
Genome IDMTKY01050963
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 35559
End posion on genome 35484
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgacgcatct
tRNA gene sequence 
GGGGCTGTGGCGCAGTTGGTAGCGCGTCTCGTTCGCAATGAGAAGGTCAGGGGTTCGAAT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
cacgacaagg
Secondary structure (Cloverleaf model)
>WENV170973777	Ala	CGC
                   t      ACCA cacgacaagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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