The detailed information of tRNA gene sequence


Sequence ID>WENV170973783
Genome IDMTKY01050981
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 101628
End posion on genome 101713
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aggcaacgcc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCTAAGGCGGCGGTCTTGAAAACCGTTAACCGAAAGGTTCGC
GGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
gaatagaaca
Secondary structure (Cloverleaf model)
>WENV170973783	Ser	TGA
                   c      GCCA gaatagaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TAACCGAAAGGTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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