The detailed information of tRNA gene sequence


Sequence ID>WENV170973790
Genome IDMTKY01051014
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 27676
End posion on genome 27589
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaacagacag
tRNA gene sequence 
GGTGAGGTGGGTGAGCGGCTGAAACCAGCAGTTTGCTAAACTGCCGTACTCGCAAGGGTA
CCGAGGGTTCGAATCCCTCCCTCACCGCtg
Downstream region at tRNA end position 
ttttttacca
Secondary structure (Cloverleaf model)
>WENV170973790	Ser	GCT
                   g      GCtg ttttttacca
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTCGCAAGGGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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