The detailed information of tRNA gene sequence


Sequence ID>WENV170973791
Genome IDMTKY01051014
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 27515
End posion on genome 27438
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tatttttttt
tRNA gene sequence 
CGGGGTGTAGCGCAGTCCGGTTAGCGCACCTGGTTTGGGACCAGGGGGTCGCAGGTTCGA
ATCCTGCCACCCCGACTA
Downstream region at tRNA end position 
cacggggagt
Secondary structure (Cloverleaf model)
>WENV170973791	Pro	TGG
                   t      ACTA cacggggagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     G
  C         C G C G       G C A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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