The detailed information of tRNA gene sequence


Sequence ID>WENV170973807
Genome IDMTKY01051050
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 22565
End posion on genome 22478
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctgggccga
tRNA gene sequence 
GGAGGGCTCGCATAGTGGCCTAGTGCGGCGGTCTTGAAAACCGCTTGGCGGGCAACCGTC
ACGTGGGTTCGAATCCCACGCCCTCCGCtc
Downstream region at tRNA end position 
gctggcgctc
Secondary structure (Cloverleaf model)
>WENV170973807	Ser	TGA
                   a      GCtc gctggcgctc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGCGGGCAACCGTCAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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