The detailed information of tRNA gene sequence


Sequence ID>WENV170973825
Genome IDMTKY01051124
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 18679
End posion on genome 18587
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctgtaatgt
tRNA gene sequence 
GGAGGGTTGTCCGAGTTGGTTGAAGGAGCGCGACTGGAAATCGCGTGTACCCCTCAAAGG
GTATCGAGAGTTCGAATCTCTTGCCCTCCGCCA
Downstream region at tRNA end position 
aggctttcct
Secondary structure (Cloverleaf model)
>WENV170973825	Ser	GGA
                   t      GCCA aggctttcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T A
                    T     T T C T C     A
    T T G A        G      + | | | |     G
  G         G C C T       G A G A G     C
  G           | | |                 T T
  T         A G G A
    T G A          G     TGTACCCCTCAAAGGGTATC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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