The detailed information of tRNA gene sequence


Sequence ID>WENV170973832
Genome IDMTKY01051201
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 16001
End posion on genome 16091
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agataatgct
tRNA gene sequence 
GGGGAGGTGCCGGAGTGGACTATCGGGGCTGCCTGCTAAGCAGTTAGGGGGTGTAGAACT
CCCTCCAGGGTTCGAATCCCTGCCTCCCCGCtg
Downstream region at tRNA end position 
tgtgatgaat
Secondary structure (Cloverleaf model)
>WENV170973832	Ser	GCT
                   t      GCtg tgtgatgaat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G       + | | |                 T T
    A       T C G G
      C T A        G     TAGGGGGTGTAGAACTCCCTC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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