The detailed information of tRNA gene sequence


Sequence ID>WENV170973839
Genome IDMTKY01051268
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10502
End posion on genome 10426
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccctagtgtt
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGTAGCGCGCACGGTTCGGGTCCGTGAGGTCTAGGGTTCAAA
TCCCTACGCCCCGACCT
Downstream region at tRNA end position 
ccgtcctcac
Secondary structure (Cloverleaf model)
>WENV170973839	Pro	CGG
                   t      ACCT ccgtcctcac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     A T C C C     A
      T G A        A      | | | | |     A
    T       C G C G       T A G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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