The detailed information of tRNA gene sequence


Sequence ID>WENV170973853
Genome IDMTKY01051393
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5777
End posion on genome 5867
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgaattggcc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAAGCGCACGCCTGGAGAGCGTGAGTGGGCTTATACCCC
ACCCTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
aacacccaaa
Secondary structure (Cloverleaf model)
>WENV170973853	Ser	GGA
                   c      GCCA aacacccaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C T G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     AGTGGGCTTATACCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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