The detailed information of tRNA gene sequence


Sequence ID>WENV170973869
Genome IDMTKY01051506
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10745
End posion on genome 10834
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgcactcgt
tRNA gene sequence 
GGAGAGGTAGCATAGTCCGGTCTAATGCGCGCGCCTGGAGAGCGCGTGAGCCGAAAGGCT
CCATGGGTTCAAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
agaaaggctc
Secondary structure (Cloverleaf model)
>WENV170973869	Ser	GGA
                   t      GCCA agaaaggctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
    C T G A        A      | | | | |     A
  C         T A C G       A T G G G     C
  G         | | | |                 T T
  G         A T G C
    T C T A        G     TGAGCCGAAAGGCTCC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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