The detailed information of tRNA gene sequence


Sequence ID>WENV170973872
Genome IDMTKY01051520
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 18233
End posion on genome 18307
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cacctgaaac
tRNA gene sequence 
AGGGGAGTGGCTCAACGGTAGAGCAACGGTCTCCAAAACCGTCGGTTGCGGGTTCAAATC
CTGTCTCCCCTGCCA
Downstream region at tRNA end position 
gaagatgagg
Secondary structure (Cloverleaf model)
>WENV170973872	Trp	CCA
                   c      GCCA gaagatgagg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
        A A        G      + | + | |     A
      C     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     CGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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