The detailed information of tRNA gene sequence


Sequence ID>WENV170973892
Genome IDMTKY01051604
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 223
End posion on genome 299
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagaaaagac
tRNA gene sequence 
AGGTGAGTAGCTCAACTGGCTAGAGCGGCGGTCTCCAAAACCGCAGGTTGCGGGTTCAAG
TCCTGCCTCACCTGCCA
Downstream region at tRNA end position 
gttttcttat
Secondary structure (Cloverleaf model)
>WENV170973892	Trp	CCA
                   c      GCCA gttttcttat
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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