The detailed information of tRNA gene sequence


Sequence ID>WENV170973921
Genome IDMTKY01051839
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 43195
End posion on genome 43284
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attatgattg
tRNA gene sequence 
GGAGAGTTGCCGGAGCGGTTGAACGGGACGGTCTCGAAAACCGTTGTATCCTCACGGGTA
CCCAGGGTTCGAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
tctatatatg
Secondary structure (Cloverleaf model)
>WENV170973921	Ser	CGA
                   g      GCCA tctatatatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTATCCTCACGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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