The detailed information of tRNA gene sequence


Sequence ID>WENV170973922
Genome IDMTKY01051845
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 24011
End posion on genome 24098
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcgctcgcta
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTTTATCGGGGCGGTCTCGAAAACCGTTGTAGTCTTAGGGCTA
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
ttaacagtct
Secondary structure (Cloverleaf model)
>WENV170973922	Ser	CGA
                   a      GCtg ttaacagtct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T T A        G     TGTAGTCTTAGGGCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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