The detailed information of tRNA gene sequence


Sequence ID>WENV170973933
Genome IDMTKY01051902
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8068
End posion on genome 8157
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcctgccgc
tRNA gene sequence 
GGAAGGGTGGCTGAGTGGTTAAAGGCACCTGACTCGAAATCAGGCGTAGGGGTAACCCTA
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
gttctatgac
Secondary structure (Cloverleaf model)
>WENV170973933	Ser	CGA
                   c      GCCA gttctatgac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T A A        A     CGTAGGGGTAACCCTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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