The detailed information of tRNA gene sequence


Sequence ID>WENV170973939
Genome IDMTKY01051924
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1309
End posion on genome 1401
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agccccatgt
tRNA gene sequence 
GGAGAGGTAGCATAGTCTGGCCTAATGCGCGCGCCTGGAGAGCGCGTGAGCGGACATTCC
GCTCCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cagcgttaga
Secondary structure (Cloverleaf model)
>WENV170973939	Ser	GGA
                   t      GCCA cagcgttaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     A
  T         T A C G       G T G G G     C
  G         | | | |                 T T
  G         A T G C
    C C T A        G     TGAGCGGACATTCCGCTCC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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