The detailed information of tRNA gene sequence


Sequence ID>WENV170973940
Genome IDMTKY01051935
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5356
End posion on genome 5443
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctcgcccac
tRNA gene sequence 
GGAGGATTCGCATAGTGGCCTAGTGCGCACGCTTGGAAAGCGTGTTGAGTGAAAGCTCTC
AGGGGTTCAAATCCCCTATCCTCCGCCA
Downstream region at tRNA end position 
gccggccgcc
Secondary structure (Cloverleaf model)
>WENV170973940	Ser	GGA
                   c      GCCA gccggccgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T A C G       A G G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGAGTGAAAGCTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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