The detailed information of tRNA gene sequence


Sequence ID>WENV170973952
Genome IDMTKY01052049
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 165
End posion on genome 242
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttgtttct
tRNA gene sequence 
GGGGCTGTAGCTCAGTCGGTTTAGAGTGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCAA
GTCCCGTCAGCCCCGCCA
Downstream region at tRNA end position 
tacgttactc
Secondary structure (Cloverleaf model)
>WENV170973952	Asp	GTC
                   t      GCCA tacgttactc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
    C T G A        A      + | | | |     A
  G         C T C G       G C G G G     C
  G         | | | +                 T T
  T         G A G T
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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