The detailed information of tRNA gene sequence


Sequence ID>WENV170973974
Genome IDMTKY01052305
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5468
End posion on genome 5396
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccctagcta
tRNA gene sequence 
GGCGACGTAGCTCAGCGGTAGAGCAGGGGACTCATAAGCCCTGGGTCGTGTGTTCAAATC
ACACCGTCGCCACtc
Downstream region at tRNA end position 
tgcacactcg
Secondary structure (Cloverleaf model)
>WENV170973974	Met	CAT
                   a      ACtc tgcacactcg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C A C     A
        G A        A      | | | | |     A
      C     C T C G       G T G T G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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