The detailed information of tRNA gene sequence


Sequence ID>WENV170973995
Genome IDMTKY01052681
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 138
End posion on genome 214
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcttttatgc
tRNA gene sequence 
AGGACTGTAGCTCAATCGGCTAGAGCAGCGGCCTCCAAAGCCGAAGGTTGGGGGTTCGAG
TCCCTCCAGTCCTGCCA
Downstream region at tRNA end position 
tgtttatgca
Secondary structure (Cloverleaf model)
>WENV170973995	Trp	CCA
                   c      GCCA tgtttatgca
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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